Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN04489864_103386 | Not Available | + | 1629918 - 1630391 | 18210.2 |
| hypothetical protein | SAMN04489864_103387 | Not Available | + | 1630409 - 1630582 | 6920.69 |
| hypothetical protein | SAMN04489864_103388 | Not Available | - | 1630619 - 1631158 | 19366.4 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04489864_103389 | Not Available | - | 1631223 - 1631684 | 16727.7 |
| hypothetical protein | SAMN04489864_103390 | Not Available | + | 1631871 - 1633175 | 49472.9 |
| putative porin | SAMN04489864_103391 | Not Available | - | 1633179 - 1635203 | 77651.5 |
| purine-nucleoside phosphorylase | SAMN04489864_103392 | Not Available | - | 1635203 - 1636018 | 29676.2 |
| lipid-a-disaccharide kinase | SAMN04489864_103393 | Not Available | - | 1635990 - 1637042 | 39965.0 |
| delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN04489864_103394 | Not Available | + | 1637139 - 1638773 | 60050.4 |
| carbonic anhydrase | SAMN04489864_103395 | Not Available | - | 1638840 - 1639496 | 24131.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.