Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucosylceramidase | SAMN04489864_103346 | Not Available | + | 1586063 - 1587517 | 52200.2 |
| hypothetical protein | SAMN04489864_103347 | Not Available | + | 1587564 - 1588010 | 16520.8 |
| hypothetical protein | SAMN04489864_103348 | Not Available | - | 1588071 - 1588538 | 17355.5 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN04489864_103349 | Not Available | - | 1588584 - 1589270 | 25852.4 |
| ketopantoate hydroxymethyltransferase | SAMN04489864_103350 | Not Available | - | 1589309 - 1590124 | 29341.5 |
| carbamoyl-phosphate synthase small subunit | SAMN04489864_103351 | Not Available | + | 1590457 - 1591569 | 40895.8 |
| abc-2 type transport system atp-binding protein | SAMN04489864_103352 | Not Available | + | 1591603 - 1592364 | 28404.2 |
| abc-2 type transport system permease protein | SAMN04489864_103353 | Not Available | + | 1592380 - 1593471 | 39799.3 |
| nad(p)h-dependent fmn reductase | SAMN04489864_103354 | Not Available | + | 1593497 - 1594060 | 20809.2 |
| enolase | SAMN04489864_103355 | Not Available | + | 1594173 - 1595468 | 46432.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.