Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_101128 | Not Available | + | 141184 - 141873 | 25989.3 |
| ferredoxin, 2fe-2s | SAMN04489864_101129 | Not Available | - | 141919 - 142248 | 11907.3 |
| thioredoxin reductase (nadph) | SAMN04489864_101130 | Not Available | - | 142250 - 143260 | 36842.6 |
| udp-2,3-diacylglucosamine hydrolase | SAMN04489864_101131 | Not Available | + | 143447 - 144196 | 29264.0 |
| peptide chain release factor 1 | SAMN04489864_101132 | Not Available | + | 144244 - 145317 | 40221.9 |
| Trna-asp | Not Available | Not Available | + | 145410 - 145483 | Not Available |
| site-specific recombinase xerd | SAMN04489864_101134 | Not Available | + | 145731 - 146948 | 46477.1 |
| hypothetical protein | SAMN04489864_101135 | Not Available | + | 147015 - 147464 | 17092.3 |
| predicted abc-type atpase | SAMN04489864_101136 | Not Available | + | 147467 - 148153 | 25563.8 |
| helix-turn-helix domain-containing protein | SAMN04489864_101137 | Not Available | + | 148565 - 149065 | 19720.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.