Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | + | 1545679 - 1545752 | Not Available |
| peroxiredoxin | SAMN04489864_103307 | Not Available | - | 1545855 - 1546319 | 17298.5 |
| dtdp-4-dehydrorhamnose reductase | SAMN04489864_103308 | Not Available | - | 1546575 - 1547483 | 33312.9 |
| atp synthase f1 subcomplex beta subunit | SAMN04489864_103309 | Not Available | + | 1547824 - 1549326 | 54059.9 |
| atp synthase f1 subcomplex epsilon subunit | SAMN04489864_103310 | Not Available | + | 1549443 - 1549688 | 8477.41 |
| branched-chain amino acid aminotransferase | SAMN04489864_103311 | Not Available | + | 1550272 - 1551162 | 33557.4 |
| dihydroxy-acid dehydratase | SAMN04489864_103312 | Not Available | + | 1551212 - 1552894 | 59568.1 |
| acetolactate synthase, large subunit | SAMN04489864_103313 | Not Available | + | 1552913 - 1554655 | 63469.5 |
| acetolactate synthase, small subunit | SAMN04489864_103314 | Not Available | + | 1554679 - 1555317 | 24430.3 |
| ketol-acid reductoisomerase | SAMN04489864_103315 | Not Available | + | 1555450 - 1556931 | 54204.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.