Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport system permease protein | SAMN04489864_103286 | Not Available | + | 1523219 - 1524073 | 32210.2 |
| lipopolysaccharide transport system atp-binding protein | SAMN04489864_103287 | Not Available | + | 1524087 - 1525313 | 45967.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04489864_103288 | Not Available | + | 1525373 - 1526203 | 32230.9 |
| glycosyl transferase family 2 | SAMN04489864_103289 | Not Available | + | 1526235 - 1527176 | 36871.2 |
| predicted dehydrogenase | SAMN04489864_103290 | Not Available | + | 1527169 - 1529304 | 79837.6 |
| glycosyl transferase family 2 | SAMN04489864_103291 | Not Available | + | 1529306 - 1530229 | 34596.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04489864_103292 | Not Available | + | 1530226 - 1531350 | 42878.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04489864_103293 | Not Available | + | 1531347 - 1532570 | 46364.6 |
| glycosyl transferases group 1 | SAMN04489864_103294 | Not Available | + | 1532574 - 1533833 | 48141.6 |
| hypothetical protein | SAMN04489864_103295 | Not Available | + | 1533826 - 1535097 | 48789.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.