Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04489864_103276 | Not Available | - | 1512644 - 1513387 | 28125.3 |
| hypothetical protein | SAMN04489864_103277 | Not Available | - | 1513419 - 1513916 | 18236.5 |
| hypothetical protein | SAMN04489864_103278 | Not Available | - | 1514273 - 1514731 | 17334.8 |
| hypothetical protein | SAMN04489864_103279 | Not Available | - | 1515030 - 1515455 | 15231.3 |
| hypothetical protein | SAMN04489864_103280 | Not Available | - | 1515659 - 1516048 | 14365.7 |
| polysaccharide export outer membrane protein | SAMN04489864_103281 | Not Available | + | 1516356 - 1517177 | 30017.5 |
| capsular exopolysaccharide family | SAMN04489864_103282 | Not Available | + | 1517177 - 1519579 | 89543.3 |
| transcription antitermination factor nusg | SAMN04489864_103283 | Not Available | + | 1519552 - 1520079 | 20164.8 |
| asparagine synthase (glutamine-hydrolysing) | SAMN04489864_103284 | Not Available | + | 1520249 - 1522036 | 67391.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04489864_103285 | Not Available | + | 1522116 - 1523225 | 41613.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.