Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN04489864_103266 | Not Available | - | 1501555 - 1502802 | 46734.4 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN04489864_103267 | Not Available | - | 1502802 - 1504259 | 53443.5 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN04489864_103268 | Not Available | - | 1504420 - 1506525 | 77444.6 |
| hypothetical protein | SAMN04489864_103269 | Not Available | - | 1506522 - 1506932 | 15796.5 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN04489864_103270 | Not Available | - | 1506929 - 1507840 | 33911.1 |
| mraz protein | SAMN04489864_103271 | Not Available | - | 1507824 - 1508294 | 17581.2 |
| phosphoglycerate kinase | SAMN04489864_103272 | Not Available | - | 1508852 - 1510042 | 42986.7 |
| predicted n-acyltransferase, gnat family | SAMN04489864_103273 | Not Available | - | 1510039 - 1510476 | 16343.6 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN04489864_103274 | Not Available | - | 1510469 - 1511464 | 35767.0 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN04489864_103275 | Not Available | - | 1511481 - 1512611 | 41519.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.