Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_103256 | Not Available | + | 1490288 - 1490377 | 3242.23 |
| hypothetical protein | SAMN04489864_103257 | Not Available | - | 1490390 - 1490566 | 6439.77 |
| glycine c-acetyltransferase | SAMN04489864_103258 | Not Available | - | 1490823 - 1492034 | 44884.3 |
| cell division protein ftsz | SAMN04489864_103259 | Not Available | - | 1492197 - 1493843 | 59990.1 |
| cell division protein ftsa | SAMN04489864_103260 | Not Available | - | 1493972 - 1495327 | 49341.8 |
| cell division protein ftsq | SAMN04489864_103261 | Not Available | - | 1495349 - 1496386 | 38506.1 |
| udp-n-acetylmuramate--l-alanine ligase | SAMN04489864_103262 | Not Available | - | 1496379 - 1497731 | 49786.8 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | SAMN04489864_103263 | Not Available | - | 1497874 - 1498980 | 39923.4 |
| cell division protein ftsw | SAMN04489864_103264 | Not Available | - | 1499037 - 1500209 | 42745.9 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN04489864_103265 | Not Available | - | 1500212 - 1501555 | 49623.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.