Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosidase | SAMN04489864_103246 | Not Available | - | 1475944 - 1477785 | 71177.9 |
| tonb-dependent receptor plug domain | SAMN04489864_103247 | Not Available | - | 1477857 - 1480775 | 105756.0 |
| penicillin amidase | SAMN04489864_103248 | Not Available | + | 1481006 - 1483438 | 92218.2 |
| hypothetical protein | SAMN04489864_103249 | Not Available | + | 1483441 - 1483791 | 12770.5 |
| acyl-protein synthetase, luxe | SAMN04489864_103250 | Not Available | + | 1483803 - 1484801 | 37089.7 |
| tyrosyl-trna synthetase | SAMN04489864_103251 | Not Available | - | 1484807 - 1486093 | 48020.4 |
| hypothetical protein | SAMN04489864_103252 | Not Available | + | 1486258 - 1486932 | 26487.0 |
| dna ligase (nad+) | SAMN04489864_103253 | Not Available | + | 1486960 - 1488972 | 75655.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04489864_103254 | Not Available | + | 1489043 - 1489924 | 31688.2 |
| hypothetical protein | SAMN04489864_103255 | Not Available | + | 1489984 - 1490316 | 12024.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.