Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family | SAMN04489864_103236 | Not Available | - | 1458495 - 1459067 | 21593.0 |
| hypothetical protein | SAMN04489864_103237 | Not Available | + | 1459214 - 1460185 | 34135.8 |
| hypothetical protein | SAMN04489864_103238 | Not Available | + | 1460296 - 1462281 | 74640.9 |
| chat domain-containing protein | SAMN04489864_103239 | Not Available | + | 1462462 - 1465146 | 101276.0 |
| 1,4-alpha-glucan branching enzyme | SAMN04489864_103240 | Not Available | - | 1465189 - 1467135 | 74918.6 |
| alpha-glucosidase | SAMN04489864_103241 | Not Available | - | 1467230 - 1469695 | 96050.4 |
| maltose/moltooligosaccharide transporter | SAMN04489864_103242 | Not Available | - | 1469710 - 1471122 | 51703.9 |
| glycosidase | SAMN04489864_103243 | Not Available | - | 1471145 - 1472935 | 67629.3 |
| maltose phosphorylase | SAMN04489864_103244 | Not Available | - | 1472965 - 1475286 | 88875.7 |
| beta-phosphoglucomutase | SAMN04489864_103245 | Not Available | - | 1475289 - 1475942 | 23958.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.