Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fecr protein | SAMN04489864_103226 | Not Available | + | 1443820 - 1444977 | 42744.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_103227 | Not Available | + | 1445134 - 1448478 | 124425.0 |
| susd family protein | SAMN04489864_103228 | Not Available | + | 1448492 - 1449922 | 53835.4 |
| protein of unknown function | SAMN04489864_103229 | Not Available | + | 1449940 - 1450698 | 28310.3 |
| pkd-like family protein | SAMN04489864_103230 | Not Available | + | 1450722 - 1452245 | 56860.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN04489864_103231 | Not Available | + | 1452270 - 1453655 | 51493.2 |
| thiol-disulfide isomerase or thioredoxin | SAMN04489864_103232 | Not Available | + | 1453720 - 1454889 | 43226.5 |
| aspartyl protease | SAMN04489864_103233 | Not Available | + | 1455072 - 1456565 | 54577.8 |
| thioredoxin-related protein | SAMN04489864_103234 | Not Available | + | 1456568 - 1457713 | 42611.5 |
| hypothetical protein | SAMN04489864_103235 | Not Available | - | 1457783 - 1458502 | 27011.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.