Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_103206 | Not Available | + | 1413985 - 1414092 | 4329.47 |
| 6-phosphofructokinase | SAMN04489864_103207 | Not Available | + | 1414059 - 1415045 | 35644.4 |
| hypothetical protein | SAMN04489864_103208 | Not Available | + | 1415042 - 1415884 | 31484.8 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN04489864_103209 | Not Available | + | 1415890 - 1416894 | 35854.8 |
| hypothetical protein | SAMN04489864_103210 | Not Available | - | 1416991 - 1417113 | 4874.25 |
| hypothetical protein | SAMN04489864_103211 | Not Available | - | 1417383 - 1417913 | 20109.6 |
| hypothetical protein | SAMN04489864_103212 | Not Available | + | 1418420 - 1418641 | 8316.46 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04489864_103213 | Not Available | - | 1418647 - 1419612 | 35314.8 |
| hypothetical protein | SAMN04489864_103214 | Not Available | - | 1419618 - 1421987 | 89911.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04489864_103215 | Not Available | + | 1422127 - 1422693 | 21861.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.