Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase alpha chain | SAMN04489864_103196 | Not Available | - | 1401639 - 1402229 | 21575.8 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN04489864_103197 | Not Available | - | 1402229 - 1403743 | 55435.8 |
| l-threonine aldolase | SAMN04489864_103198 | Not Available | - | 1403750 - 1404775 | 36831.4 |
| transcriptional regulator, laci family | SAMN04489864_103199 | Not Available | + | 1405031 - 1406047 | 37974.5 |
| iron complex outermembrane recepter protein | SAMN04489864_103200 | Not Available | + | 1406487 - 1409444 | 107003.0 |
| starch-binding associating with outer membrane | SAMN04489864_103201 | Not Available | + | 1409458 - 1411041 | 57624.8 |
| suse outer membrane protein | SAMN04489864_103202 | Not Available | + | 1411061 - 1412068 | 35123.7 |
| hypothetical protein | SAMN04489864_103203 | Not Available | - | 1412168 - 1412305 | 5449.77 |
| badf-type atpase | SAMN04489864_103204 | Not Available | + | 1412350 - 1413201 | 31925.5 |
| 8-oxo-dgtp diphosphatase | SAMN04489864_103205 | Not Available | - | 1413243 - 1413932 | 26462.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.