Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase-like domain-containing protein | SAMN04489864_103176 | Not Available | + | 1381489 - 1381851 | 13665.2 |
| arsenate reductase | SAMN04489864_103177 | Not Available | - | 1381824 - 1382198 | 14222.1 |
| sh3 domain-containing protein | SAMN04489864_103178 | Not Available | - | 1382191 - 1383393 | 44231.1 |
| phosphoglycerol transferase mdob | SAMN04489864_103179 | Not Available | + | 1383544 - 1385475 | 73670.8 |
| gtra-like protein | SAMN04489864_103180 | Not Available | + | 1385478 - 1385963 | 18556.1 |
| quaternary ammonium compound-resistance protein suge | SAMN04489864_103181 | Not Available | + | 1385965 - 1386291 | 11770.8 |
| phenylalanine-4-hydroxylase | SAMN04489864_103182 | Not Available | + | 1386386 - 1388170 | 67011.5 |
| short-chain dehydrogenase | SAMN04489864_103183 | Not Available | + | 1388214 - 1388915 | 25032.5 |
| nlpc/p60 family protein | SAMN04489864_103184 | Not Available | + | 1388970 - 1389500 | 19533.6 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04489864_103185 | Not Available | - | 1389507 - 1390394 | 32410.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.