Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone hsca | SAMN04489864_103146 | Not Available | + | 1343193 - 1345055 | 68140.6 |
| hypothetical protein | SAMN04489864_103147 | Not Available | - | 1345110 - 1346204 | 39922.8 |
| protein of unknown function | SAMN04489864_103148 | Not Available | - | 1346449 - 1349061 | 95944.3 |
| dna polymerase iii, delta subunit | SAMN04489864_103149 | Not Available | - | 1349131 - 1350156 | 39101.4 |
| type i restriction enzyme r protein n terminus (hsdr_n) | SAMN04489864_103150 | Not Available | + | 1350214 - 1350672 | 17848.5 |
| predicted dehydrogenase | SAMN04489864_103151 | Not Available | - | 1350674 - 1351861 | 44159.9 |
| protein of unknown function | SAMN04489864_103152 | Not Available | - | 1351861 - 1353231 | 50159.6 |
| predicted dehydrogenase | SAMN04489864_103153 | Not Available | - | 1353253 - 1354608 | 50487.9 |
| hypothetical protein | SAMN04489864_103154 | Not Available | - | 1354742 - 1355263 | 19686.7 |
| valyl-trna synthetase | SAMN04489864_103155 | Not Available | - | 1355278 - 1357965 | 103317.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.