Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_103136 | Not Available | - | 1331565 - 1331831 | 10002.0 |
| atp-dependent rna helicase rhle | SAMN04489864_103137 | Not Available | - | 1331885 - 1333228 | 50508.4 |
| dihydroorotase | SAMN04489864_103138 | Not Available | + | 1333329 - 1334663 | 49120.8 |
| protein of unknown function | SAMN04489864_103139 | Not Available | + | 1334687 - 1335775 | 42052.4 |
| pp_01180 | SAMN04489864_103140 | Not Available | - | 1335762 - 1336343 | Not Available |
| dna-binding transcriptional regulator, acrr family | SAMN04489864_103141 | Not Available | + | 1336552 - 1337151 | 23159.8 |
| hypothetical protein | SAMN04489864_103142 | Not Available | - | 1337148 - 1337243 | 3608.72 |
| membrane fusion protein, multidrug efflux system | SAMN04489864_103143 | Not Available | + | 1337272 - 1338465 | 42915.7 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04489864_103144 | Not Available | + | 1338469 - 1341612 | 113662.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04489864_103145 | Not Available | + | 1341691 - 1343124 | 52639.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.