Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase i | SAMN04489864_101108 | Not Available | + | 107748 - 108383 | 24234.2 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN04489864_101109 | Not Available | + | 108649 - 109524 | 30795.2 |
| hamp domain-containing protein | SAMN04489864_101110 | Not Available | + | 109537 - 113265 | 142953.0 |
| hypothetical protein | SAMN04489864_101111 | Not Available | - | 113258 - 114163 | 34247.7 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN04489864_101112 | Not Available | + | 114381 - 115922 | 58813.0 |
| zinc protease | SAMN04489864_101113 | Not Available | - | 116015 - 118864 | 105184.0 |
| predicted acyltransferase | SAMN04489864_101114 | Not Available | - | 118927 - 120078 | 43136.7 |
| transposase is200 like | SAMN04489864_101115 | Not Available | - | 120195 - 120701 | 20518.4 |
| glucosamine-6-phosphate deaminase | SAMN04489864_101116 | Not Available | - | 120943 - 122862 | 72656.8 |
| anhydro-n-acetylmuramic acid kinase | SAMN04489864_101117 | Not Available | + | 123055 - 124254 | 43007.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.