Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_103116 | Not Available | - | 1315972 - 1316478 | 18679.5 |
| abc-2 type transport system atp-binding protein | SAMN04489864_103117 | Not Available | + | 1316631 - 1317542 | 34521.8 |
| abc-2 type transport system permease protein | SAMN04489864_103118 | Not Available | + | 1317535 - 1318875 | 49820.9 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN04489864_103119 | Not Available | + | 1318881 - 1319780 | 33104.3 |
| septum formation protein | SAMN04489864_103120 | Not Available | - | 1319789 - 1320358 | 21224.5 |
| hypothetical protein | SAMN04489864_103121 | Not Available | - | 1320452 - 1320862 | 15173.5 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN04489864_103122 | Not Available | - | 1321012 - 1321536 | 19204.2 |
| fes assembly protein iscx | SAMN04489864_103123 | Not Available | - | 1321540 - 1321782 | 9800.24 |
| ferredoxin, 2fe-2s | SAMN04489864_103124 | Not Available | - | 1321831 - 1322163 | 12138.5 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN04489864_103125 | Not Available | - | 1322203 - 1322964 | 27902.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.