Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_103106 | Not Available | + | 1308082 - 1308735 | 24316.4 |
| sh3 domain-containing protein | SAMN04489864_103107 | Not Available | - | 1308740 - 1309519 | 29837.4 |
| nucleotide-binding universal stress protein, uspa family | SAMN04489864_103108 | Not Available | + | 1309608 - 1310051 | 15820.0 |
| 4fe-4s dicluster domain-containing protein | SAMN04489864_103109 | Not Available | - | 1310121 - 1310471 | 12630.4 |
| acyl-coa reductase (luxc) | SAMN04489864_103110 | Not Available | + | 1310550 - 1311575 | 38738.2 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04489864_103111 | Not Available | + | 1311662 - 1313059 | 50718.3 |
| hypothetical protein | SAMN04489864_103112 | Not Available | + | 1313081 - 1313284 | 7799.65 |
| cell division transport system atp-binding protein | SAMN04489864_103113 | Not Available | + | 1313288 - 1313971 | 25405.8 |
| molecular chaperone grpe | SAMN04489864_103114 | Not Available | + | 1314147 - 1314728 | 21876.1 |
| molecular chaperone dnaj | SAMN04489864_103115 | Not Available | + | 1314733 - 1315902 | 41593.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.