Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04489864_10376 | Not Available | - | 1278479 - 1279036 | 21071.9 |
| doxx-like family protein | SAMN04489864_10377 | Not Available | - | 1279048 - 1279428 | 14140.9 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04489864_10378 | Not Available | - | 1279431 - 1279904 | 18117.9 |
| dna-binding transcriptional regulator, arsr family | SAMN04489864_10379 | Not Available | - | 1279904 - 1280221 | 12263.0 |
| hypothetical protein | SAMN04489864_10380 | Not Available | - | 1280283 - 1281530 | 47210.1 |
| integral membrane protein | SAMN04489864_10381 | Not Available | - | 1281601 - 1281885 | 10796.7 |
| molecular chaperone hscb | SAMN04489864_10382 | Not Available | - | 1281997 - 1282518 | 20818.6 |
| regulator of sigma e protease | SAMN04489864_10383 | Not Available | - | 1282563 - 1283954 | 51250.3 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN04489864_10384 | Not Available | - | 1283998 - 1285143 | 41748.1 |
| gh3 auxin-responsive promoter | SAMN04489864_10385 | Not Available | - | 1285177 - 1286679 | 56639.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.