Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_10366 | Not Available | + | 1271609 - 1272097 | 18748.4 |
| uncharacterized membrane protein | SAMN04489864_10367 | Not Available | - | 1272102 - 1272692 | 21519.8 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN04489864_10368 | Not Available | - | 1272724 - 1275183 | 91579.7 |
| regulatory protein | SAMN04489864_10369 | Not Available | + | 1275243 - 1275734 | 18893.2 |
| Trna-gly | Not Available | Not Available | + | 1275861 - 1275936 | Not Available |
| Trna-leu | Not Available | Not Available | + | 1275987 - 1276071 | Not Available |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04489864_10372 | Not Available | - | 1276166 - 1277005 | 30848.6 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04489864_10373 | Not Available | - | 1277005 - 1277490 | 18441.9 |
| regulatory protein, arsr family | SAMN04489864_10374 | Not Available | - | 1277498 - 1277815 | 12355.2 |
| hypothetical protein | SAMN04489864_10375 | Not Available | + | 1278068 - 1278421 | 12930.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.