Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_10346 | Not Available | + | 1249290 - 1249922 | 23277.1 |
| winged helix dna-binding domain-containing protein | SAMN04489864_10347 | Not Available | + | 1249922 - 1250218 | 11001.5 |
| protein of unknown function | SAMN04489864_10348 | Not Available | + | 1250271 - 1251845 | 61016.0 |
| succinyl-coa synthetase beta subunit | SAMN04489864_10349 | Not Available | + | 1251906 - 1253096 | 42714.5 |
| signal transduction histidine kinase | SAMN04489864_10350 | Not Available | - | 1253512 - 1254831 | 49526.6 |
| asparaginyl-trna synthetase | SAMN04489864_10351 | Not Available | + | 1254949 - 1256385 | 54947.8 |
| glutamate synthase domain-containing protein 2 | SAMN04489864_10352 | Not Available | - | 1256390 - 1258030 | 60103.5 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN04489864_10353 | Not Available | + | 1258130 - 1258750 | 22842.5 |
| na+:h+ antiporter, nhaa family | SAMN04489864_10354 | Not Available | + | 1258780 - 1259946 | 41951.7 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04489864_10355 | Not Available | + | 1260004 - 1261107 | 42049.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.