Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN04489864_10198 | Not Available | + | 99835 - 101238 | 55078.4 |
| phosphosulfolactate synthase | SAMN04489864_10199 | Not Available | + | 101326 - 102093 | 28812.7 |
| shikimate dehydrogenase | SAMN04489864_101100 | Not Available | + | 102097 - 102837 | 27224.7 |
| gliding motility-associated lipoprotein gldd | SAMN04489864_101101 | Not Available | + | 102779 - 103420 | 24797.9 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04489864_101102 | Not Available | + | 103434 - 104072 | 23767.2 |
| lipoprotein-releasing system permease protein | SAMN04489864_101103 | Not Available | + | 104086 - 105318 | 45231.7 |
| hypothetical protein | SAMN04489864_101104 | Not Available | + | 105321 - 105704 | 14063.1 |
| 1,4-dihydroxy-6-naphthoate synthase | SAMN04489864_101105 | Not Available | - | 105707 - 106564 | 31739.3 |
| futalosine hydrolase | SAMN04489864_101106 | Not Available | - | 106561 - 107214 | 24026.8 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN04489864_101107 | Not Available | + | 107322 - 107732 | 15796.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.