Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_10326 | Not Available | - | 1227045 - 1227674 | 23741.5 |
| hypothetical protein | SAMN04489864_10327 | Not Available | + | 1227817 - 1228965 | 45073.1 |
| hepn domain-containing protein | SAMN04489864_10328 | Not Available | + | 1228978 - 1229871 | 34221.3 |
| lyttr dna-binding domain-containing protein | SAMN04489864_10329 | Not Available | - | 1229848 - 1230696 | 32841.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04489864_10330 | Not Available | + | 1230906 - 1231403 | 18849.9 |
| carboxymethylenebutenolidase | SAMN04489864_10331 | Not Available | - | 1231408 - 1232277 | 31511.9 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN04489864_10332 | Not Available | - | 1232356 - 1235679 | 120056.0 |
| dihydrolipoamide dehydrogenase | SAMN04489864_10333 | Not Available | + | 1236001 - 1237389 | 49001.5 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04489864_10334 | Not Available | + | 1237524 - 1238363 | 31916.1 |
| calcineurin-like phosphoesterase | SAMN04489864_10335 | Not Available | + | 1238712 - 1239512 | 29728.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.