Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04489864_10316 | Not Available | - | 1211987 - 1212502 | 18787.7 |
| fructose-1,6-bisphosphatase i | SAMN04489864_10317 | Not Available | - | 1212556 - 1213602 | 37943.5 |
| hypothetical protein | SAMN04489864_10318 | Not Available | - | 1213626 - 1214117 | 18572.3 |
| cubico group peptidase, beta-lactamase class c family | SAMN04489864_10319 | Not Available | - | 1214123 - 1215937 | 67456.9 |
| trna1val (adenine37-n6)-methyltransferase | SAMN04489864_10320 | Not Available | - | 1216019 - 1216723 | 26592.1 |
| phosphoribosylformylglycinamidine synthase | SAMN04489864_10321 | Not Available | + | 1216757 - 1220479 | 135927.0 |
| asparagine synthase (glutamine-hydrolysing) | SAMN04489864_10322 | Not Available | + | 1220697 - 1222460 | 68100.6 |
| outer membrane transport energization protein tonb | SAMN04489864_10323 | Not Available | - | 1222457 - 1223299 | 30672.7 |
| glutamine synthetase | SAMN04489864_10324 | Not Available | + | 1223578 - 1225761 | 81314.3 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN04489864_10325 | Not Available | + | 1225861 - 1227048 | 43092.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.