Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_102478 | Not Available | + | 1185443 - 1187389 | 71322.8 |
| hexosaminidase | SAMN04489864_102479 | Not Available | + | 1187472 - 1189994 | 95562.2 |
| predicted dehydrogenase | SAMN04489864_102480 | Not Available | + | 1189997 - 1191007 | 36955.6 |
| putative esterase | SAMN04489864_102481 | Not Available | - | 1191192 - 1192640 | 53838.5 |
| transposase | SAMN04489864_102482 | Not Available | + | 1193279 - 1193644 | 13923.0 |
| transposase inso and inactivated derivatives | SAMN04489864_102483 | Not Available | + | 1193674 - 1194564 | 34887.2 |
| hypothetical protein | SAMN04489864_1032 | Not Available | - | 1195069 - 1195383 | 11858.5 |
| disulphide bond corrector protein dsbc | SAMN04489864_1033 | Not Available | - | 1195395 - 1195841 | 16832.7 |
| hypothetical protein | SAMN04489864_1034 | Not Available | - | 1195847 - 1196335 | 18096.0 |
| peroxiredoxin | SAMN04489864_1035 | Not Available | - | 1196367 - 1197890 | 57310.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.