Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_102458 | Not Available | + | 1156794 - 1157312 | 19318.0 |
| beta-galactosidase | SAMN04489864_102459 | Not Available | + | 1157399 - 1160050 | 99778.6 |
| chitinase | SAMN04489864_102460 | Not Available | + | 1160089 - 1161222 | 42599.0 |
| beta-galactosidase | SAMN04489864_102461 | Not Available | + | 1161223 - 1163682 | 93040.0 |
| alginate lyase | SAMN04489864_102462 | Not Available | + | 1163745 - 1164905 | 43885.1 |
| glycosyl hydrolase family 88 | SAMN04489864_102463 | Not Available | + | 1164932 - 1166104 | 44217.7 |
| d-mannonate dehydratase | SAMN04489864_102464 | Not Available | + | 1166253 - 1167416 | 43092.4 |
| hypothetical protein | SAMN04489864_102465 | Not Available | - | 1167455 - 1169215 | 62595.2 |
| hypothetical protein | SAMN04489864_102466 | Not Available | - | 1169212 - 1169952 | 27218.0 |
| Trna-arg | Not Available | Not Available | + | 1170235 - 1170308 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.