Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_102448 | Not Available | - | 1140373 - 1141059 | 25646.6 |
| susd family protein | SAMN04489864_102449 | Not Available | - | 1141077 - 1142651 | 59965.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_102450 | Not Available | - | 1142662 - 1145814 | 115665.0 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN04489864_102451 | Not Available | + | 1146009 - 1147823 | 68945.6 |
| protein of unknown function | SAMN04489864_102452 | Not Available | + | 1147913 - 1148662 | 27109.8 |
| phosphoribosyl-atp pyrophosphohydrolase | SAMN04489864_102453 | Not Available | + | 1148696 - 1149166 | 17543.9 |
| acyl dehydratase | SAMN04489864_102454 | Not Available | + | 1149202 - 1149660 | 17387.1 |
| 7tmr-dism extracellular 2 | SAMN04489864_102455 | Not Available | + | 1149704 - 1151617 | 75022.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_102456 | Not Available | + | 1151943 - 1155104 | 116674.0 |
| starch-binding associating with outer membrane | SAMN04489864_102457 | Not Available | + | 1155091 - 1156761 | 61926.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.