Dyadobacter koreensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Dyadobacter

Description

Dyadobacter koreensis is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and thrives optimally at a temperature of 25°C. This organism is part of a group of soil-dwelling bacteria, which are recognized for their potential roles in nutrient cycling and soil health. The Gram-negative nature of D. koreensis suggests the presence of a complex outer membrane structure, which may contribute to its adaptability to various environmental conditions. The aerobic requirement indicates that D. koreensis relies on oxygen for its metabolic processes, which may influence its distribution in well-aerated soil environments. The optimal growth temperature of 25°C positions it within the mesophilic range, suggesting that it is well-adapted to temperate climates where soil temperatures frequently fall within this range. In the context of its ecological role, D. koreensis may participate in the degradation of organic matter in soil, thereby contributing to the nutrient dynamics essential for plant growth and microbial diversity. The specific metabolic pathways and interactions with other soil microorganisms, while not detailed here, are likely to play a significant role in its ecological function, making it a potentially valuable component of soil microbiomes. Understanding the characteristics of D. koreensis can provide insights into microbial community structures and their contributions to ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusDyadobacter
SpeciesDyadobacter koreensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyadobacter koreensis

Accession NumberFNXY00000000.1

Gene Summary

Adenine Count

2149081 bp

Thymine Count

2159768 bp

Guanine Count

1504187 bp

Cytosine Count

1522284 bp

Genome Length

7340093 bp

Protein-coding Genes

5989 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
peptidase family m50SAMN04487995_1569Not Available-1909502 - 191062942340.1
putative hydrolase of the had superfamilySAMN04487995_1570Not Available-1910688 - 191132323973.1
acetyl-coa carboxylase carboxyl transferase subunit alphaSAMN04487995_1571Not Available-1911342 - 191229535833.6
metallo-beta-lactamase family proteinSAMN04487995_1572Not Available-1912323 - 191374753316.4
d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4)SAMN04487995_1573Not Available+1914058 - 191550352013.9
acetyltransferase (gnat) domain-containing proteinSAMN04487995_1574Not Available+1915514 - 191592416103.5
atp dependent peptidase codwx, codw component. threonine peptidase. merops family t01bSAMN04487995_1575Not Available-1915965 - 191650719227.3
hypothetical proteinSAMN04487995_1576Not Available-1916644 - 191691910527.7
pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase)SAMN04487995_1577Not Available-1916947 - 191864459902.3
gtp-binding protein lepaSAMN04487995_1578Not Available-1918762 - 192054966882.4

Displaying genes 1521 – 1530 of 6032 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites