Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05421827_12043 | Not Available | - | 4631823 - 4632782 | 35714.1 |
| hypothetical protein | SAMN05421827_12044 | Not Available | + | 4632917 - 4633411 | 18929.0 |
| dinb superfamily protein | SAMN05421827_12045 | Not Available | + | 4633415 - 4633921 | 19212.2 |
| hypothetical protein | SAMN05421827_12046 | Not Available | + | 4633941 - 4634354 | 15922.9 |
| phnb protein | SAMN05421827_12047 | Not Available | + | 4634488 - 4634904 | 15204.2 |
| doxx protein | SAMN05421827_12048 | Not Available | + | 4635273 - 4635650 | 13827.9 |
| hypothetical protein | SAMN05421827_12049 | Not Available | + | 4635751 - 4636182 | 16269.8 |
| uncharacterized protein | SAMN05421827_12050 | Not Available | + | 4636190 - 4637209 | 36605.5 |
| integral membrane protein, ykoy family | SAMN05421827_12051 | Not Available | + | 4637349 - 4638164 | 30579.8 |
| putative hydrolase of the had superfamily | SAMN05421827_12052 | Not Available | + | 4638269 - 4638973 | 26937.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.