Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase ycbb/ykud | SAMN05421827_101123 | Not Available | + | 125229 - 126794 | 58656.4 |
| l,d-transpeptidase catalytic domain | SAMN05421827_101124 | Not Available | - | 126791 - 127522 | 26568.4 |
| glycosyltransferase, gt2 family | SAMN05421827_101125 | Not Available | + | 127844 - 128665 | 31057.4 |
| glycosyltransferase family 28 c-terminal domain-containing protein | SAMN05421827_101126 | Not Available | - | 128662 - 129612 | 35176.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_101127 | Not Available | - | 129710 - 130780 | 39495.4 |
| protein of unknown function | SAMN05421827_101128 | Not Available | + | 130962 - 131270 | 11339.4 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN05421827_101129 | Not Available | + | 131355 - 131699 | 13092.8 |
| peptidase family s41 | SAMN05421827_101130 | Not Available | - | 131811 - 133277 | 56687.9 |
| helix-turn-helix domain-containing protein | SAMN05421827_101131 | Not Available | - | 133464 - 134324 | 33668.6 |
| hypothetical protein | SAMN05421827_101132 | Not Available | - | 134449 - 135648 | 46992.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.