Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transmembrane family 220, helix | SAMN05421827_102300 | Not Available | - | 1064423 - 1064803 | 14303.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05421827_102301 | Not Available | - | 1065249 - 1066163 | 35095.8 |
| acetyltransferase (gnat) family protein | SAMN05421827_102302 | Not Available | + | 1066188 - 1066730 | 20932.8 |
| eama-like transporter family protein | SAMN05421827_102303 | Not Available | + | 1066730 - 1067632 | 32844.4 |
| hypothetical protein | SAMN05421827_102304 | Not Available | + | 1067675 - 1068874 | 45873.6 |
| non-heme chloroperoxidase | SAMN05421827_102305 | Not Available | - | 1069398 - 1070219 | 30522.2 |
| thioredoxin | SAMN05421827_102306 | Not Available | - | 1070376 - 1070891 | 19030.5 |
| cytosol aminopeptidase family, n-terminal domain | SAMN05421827_102307 | Not Available | - | 1071007 - 1071741 | 25933.5 |
| hypothetical protein | SAMN05421827_102308 | Not Available | - | 1071991 - 1072542 | 21611.7 |
| 2,4-dienoyl-coa reductase | SAMN05421827_102309 | Not Available | - | 1072560 - 1073618 | 38903.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.