Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_101636 | Not Available | - | 693189 - 695048 | 69859.6 |
| dna polymerase-3 subunit epsilon | SAMN05421827_101637 | Not Available | - | 695136 - 696089 | 36237.2 |
| transglutaminase-like superfamily protein | SAMN05421827_101638 | Not Available | + | 696273 - 698246 | 75651.4 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05421827_101639 | Not Available | + | 698248 - 700155 | 72226.2 |
| hypothetical protein | SAMN05421827_101640 | Not Available | - | 700139 - 700261 | 4648.83 |
| l,d-transpeptidase catalytic domain | SAMN05421827_101641 | Not Available | + | 700517 - 701302 | 28892.3 |
| hypothetical protein | SAMN05421827_101642 | Not Available | - | 701299 - 701751 | 17244.3 |
| dna topoisomerase-3 | SAMN05421827_101643 | Not Available | + | 701953 - 703806 | 69315.3 |
| superfamily i dna and/or rna helicase | SAMN05421827_101644 | Not Available | - | 703808 - 705721 | 71605.4 |
| protein of unknown function | SAMN05421827_101645 | Not Available | - | 705791 - 706174 | 14577.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.