Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421827_101586 | Not Available | - | 634626 - 635318 | 26425.3 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05421827_101587 | Not Available | - | 635305 - 636759 | 55801.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421827_101588 | Not Available | + | 636911 - 639253 | 88206.3 |
| hypothetical protein | SAMN05421827_101589 | Not Available | - | 639513 - 640214 | 25803.0 |
| hypothetical protein | SAMN05421827_101590 | Not Available | - | 640211 - 640639 | 16370.0 |
| cytochrome c oxidase accessory protein fixg | SAMN05421827_101591 | Not Available | - | 640763 - 642142 | 52564.5 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN05421827_101592 | Not Available | - | 642126 - 643094 | 35831.2 |
| hypothetical protein | SAMN05421827_101593 | Not Available | - | 643081 - 643263 | 7046.7 |
| cytochrome c oxidase cbb3-type subunit i/ii | SAMN05421827_101594 | Not Available | - | 643267 - 645408 | 81046.9 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN05421827_101595 | Not Available | - | 645481 - 645660 | 6722.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.