Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421827_101556 | Not Available | - | 603542 - 604123 | 22112.3 |
| d-alanine-d-alanine ligase | SAMN05421827_101557 | Not Available | - | 604274 - 605260 | 36628.8 |
| pasta domain, binds beta-lactams | SAMN05421827_101558 | Not Available | + | 605461 - 606231 | 28005.0 |
| upf0755 protein | SAMN05421827_101559 | Not Available | + | 606249 - 607304 | 40004.5 |
| acyl-coa thioester hydrolase | SAMN05421827_101560 | Not Available | + | 607304 - 607708 | 15758.2 |
| membrane protein | SAMN05421827_101561 | Not Available | + | 607721 - 608710 | 37817.2 |
| Trna-ser | Not Available | Not Available | + | 608805 - 608889 | Not Available |
| phage integrase sam-like domain-containing protein | SAMN05421827_101563 | Not Available | + | 609380 - 609928 | 21062.2 |
| hypothetical protein | SAMN05421827_101564 | Not Available | - | 610095 - 610949 | 33481.5 |
| glycosyltransferase sugar-binding region containing dxd motif-containing protein | SAMN05421827_101565 | Not Available | - | 610949 - 611716 | 29502.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.