Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | SAMN05421827_1378 | Not Available | + | 5636036 - 5637088 | 41418.0 |
| two-component system, lytt family, response regulator | SAMN05421827_1379 | Not Available | + | 5637085 - 5637819 | 27858.9 |
| putative auto-transporter adhesin, head gin domain | SAMN05421827_13710 | Not Available | + | 5637894 - 5638574 | 23983.1 |
| 4'-phosphopantetheinyl transferase | SAMN05421827_13711 | Not Available | + | 5638561 - 5639337 | 29595.6 |
| histone methylation protein dot1 | SAMN05421827_13712 | Not Available | + | 5639409 - 5640302 | 34778.1 |
| lysozyme | SAMN05421827_1381 | Not Available | - | 5641420 - 5642316 | 34845.4 |
| hypothetical protein | SAMN05421827_1382 | Not Available | - | 5643359 - 5644663 | 49997.8 |
| helix-turn-helix domain-containing protein | SAMN05421827_1383 | Not Available | + | 5644985 - 5645209 | 8436.13 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN05421827_1384 | Not Available | - | 5645514 - 5647442 | 73998.9 |
| predicted atp-dependent endonuclease of the old family, contains p-loop atpase and toprim domains | SAMN05421827_1385 | Not Available | - | 5647424 - 5649520 | 80541.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.