Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase | SAMN05421827_13613 | Not Available | - | 5623304 - 5624500 | 43234.7 |
| rna polymerase rpb6 | SAMN05421827_13614 | Not Available | - | 5624578 - 5624904 | 12503.7 |
| outer membrane protein assembly factor bamd | SAMN05421827_13615 | Not Available | - | 5624908 - 5625855 | 36446.2 |
| non-ribosomal peptide synthase domain tigr01720 | SAMN05421827_1371 | Not Available | + | 5626241 - 5628070 | 71261.2 |
| putative atp-binding cassette transporter/putative atp-binding cassette transporter | SAMN05421827_1372 | Not Available | + | 5628057 - 5629712 | 63390.3 |
| surfactin synthase thioesterase subunit | SAMN05421827_1373 | Not Available | + | 5629715 - 5630404 | 26285.6 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05421827_1374 | Not Available | + | 5630422 - 5631645 | 47207.1 |
| hypothetical protein | SAMN05421827_1375 | Not Available | + | 5631693 - 5632400 | 28097.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421827_1376 | Not Available | + | 5632525 - 5634969 | 90928.9 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05421827_1377 | Not Available | + | 5634985 - 5636052 | 41936.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.