Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421827_101485 | Not Available | + | 530935 - 531699 | 27134.7 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05421827_101486 | Not Available | + | 531734 - 532588 | 30781.8 |
| l-rhamnose mutarotase | SAMN05421827_101487 | Not Available | + | 532590 - 532919 | 12777.3 |
| l-fuconolactonase | SAMN05421827_101488 | Not Available | + | 532932 - 533753 | 32228.4 |
| l-lactate dehydrogenase (cytochrome) | SAMN05421827_101489 | Not Available | + | 534100 - 535269 | 43030.3 |
| hypothetical protein | SAMN05421827_101490 | Not Available | - | 535297 - 535416 | 4405.06 |
| aldose 1-epimerase | SAMN05421827_101491 | Not Available | - | 535650 - 536801 | 41615.2 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05421827_101492 | Not Available | + | 537003 - 537674 | 24854.6 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05421827_101493 | Not Available | + | 537677 - 538375 | 26821.5 |
| Trna-lys | Not Available | Not Available | + | 538584 - 538656 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.