Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_12711 | Not Available | + | 5180490 - 5180885 | 14695.5 |
| hypothetical protein | SAMN05421827_12712 | Not Available | + | 5181015 - 5181410 | 14574.1 |
| uncharacterized conserved protein, implicated in type vi secretion and phage assembly | SAMN05421827_12713 | Not Available | + | 5181758 - 5183620 | 69308.4 |
| hypothetical protein | SAMN05421827_12714 | Not Available | + | 5183623 - 5183793 | 6122.53 |
| type vi secretion system (t6ss), amidase effector protein 4 | SAMN05421827_12715 | Not Available | + | 5183797 - 5184756 | 36853.1 |
| hypothetical protein | SAMN05421827_12716 | Not Available | + | 5184767 - 5185534 | 29767.4 |
| hypothetical protein | SAMN05421827_12717 | Not Available | + | 5185724 - 5186680 | 37024.1 |
| protein of unknown function | SAMN05421827_12718 | Not Available | + | 5186684 - 5187163 | 17143.2 |
| outer membrane protein ompa | SAMN05421827_12719 | Not Available | + | 5187167 - 5189767 | 98263.1 |
| hypothetical protein | SAMN05421827_12720 | Not Available | + | 5189778 - 5190473 | 26603.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.