Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_12330 | Not Available | + | 4911967 - 4915239 | 118736.0 |
| starch-binding associating with outer membrane | SAMN05421827_12331 | Not Available | + | 4915250 - 4916779 | 56940.7 |
| hypothetical protein | SAMN05421827_12332 | Not Available | - | 4917152 - 4917799 | 24808.8 |
| hypothetical protein | SAMN05421827_12333 | Not Available | + | 4917895 - 4919067 | 46020.0 |
| hepn domain-containing protein | SAMN05421827_12334 | Not Available | + | 4919033 - 4919884 | 32761.7 |
| hypothetical protein | SAMN05421827_12335 | Not Available | - | 4920036 - 4920461 | 16477.3 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | SAMN05421827_12337 | Not Available | + | 4920826 - 4921665 | 31357.3 |
| 2-deoxy-d-gluconate 3-dehydrogenase | SAMN05421827_12338 | Not Available | + | 4921680 - 4922444 | 26869.1 |
| carbonic anhydrase | SAMN05421827_12339 | Not Available | - | 4922818 - 4923444 | 23755.5 |
| hypothetical protein | SAMN05421827_12340 | Not Available | - | 4923836 - 4924444 | 23124.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.