Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | SAMN05421827_12318 | Not Available | + | 4898060 - 4900873 | 104275.0 |
| lyse type translocator | SAMN05421827_12319 | Not Available | + | 4900882 - 4901535 | 24654.0 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05421827_12320 | Not Available | - | 4902031 - 4903350 | 48164.7 |
| hypothetical protein | SAMN05421827_12321 | Not Available | - | 4903356 - 4903796 | 15416.9 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421827_12322 | Not Available | + | 4903992 - 4904837 | 31898.4 |
| hypothetical protein | SAMN05421827_12323 | Not Available | + | 4904854 - 4905693 | 30244.9 |
| 40-residue yvtn family beta-propeller repeat-containing protein | SAMN05421827_12324 | Not Available | + | 4905717 - 4908158 | 89284.0 |
| peptide-methionine (s)-s-oxide reductase | SAMN05421827_12325 | Not Available | - | 4908295 - 4908786 | 18612.5 |
| hypothetical protein | SAMN05421827_12328 | Not Available | - | 4909515 - 4910390 | 33033.8 |
| duf218 domain-containing protein | SAMN05421827_12329 | Not Available | - | 4910395 - 4911642 | 47178.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.