Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | + | 4856078 - 4856151 | Not Available |
| carboxypeptidase regulatory-like domain-containing protein | SAMN05421827_12251 | Not Available | - | 4856489 - 4859740 | 119218.0 |
| n-acetylglutamate synthase, gnat family | SAMN05421827_12252 | Not Available | + | 4859939 - 4860628 | 25463.9 |
| zinc protease | SAMN05421827_12253 | Not Available | - | 4861231 - 4864089 | 107154.0 |
| peroxiredoxin | SAMN05421827_12254 | Not Available | - | 4864153 - 4865331 | 43741.8 |
| susd family protein | SAMN05421827_12255 | Not Available | - | 4865342 - 4866721 | 52044.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_12256 | Not Available | - | 4866731 - 4870090 | 124846.0 |
| fecr protein | SAMN05421827_12257 | Not Available | - | 4870228 - 4871382 | 43281.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_12258 | Not Available | - | 4871452 - 4872027 | 22432.9 |
| hypothetical protein | SAMN05421827_12259 | Not Available | - | 4872238 - 4872690 | 17584.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.