Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-iminobutanoate/2-iminopropanoate deaminase | SAMN05421827_12163 | Not Available | + | 4759698 - 4760078 | 13666.4 |
| atp-dependent dna helicase recg | SAMN05421827_12164 | Not Available | + | 4760354 - 4762459 | 79819.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_12165 | Not Available | + | 4762886 - 4766158 | 120936.0 |
| starch-binding associating with outer membrane | SAMN05421827_12166 | Not Available | + | 4766193 - 4768064 | 70445.7 |
| predicted arabinose efflux permease, mfs family | SAMN05421827_12167 | Not Available | + | 4768237 - 4769523 | 46938.7 |
| phospholipase_d-nuclease n-terminal | SAMN05421827_12168 | Not Available | - | 4769772 - 4769987 | 8088.48 |
| atp-binding cassette, subfamily b | SAMN05421827_12169 | Not Available | - | 4770007 - 4771758 | 65003.3 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN05421827_12170 | Not Available | - | 4771861 - 4775085 | 117426.0 |
| imidazolonepropionase | SAMN05421827_12171 | Not Available | - | 4775601 - 4776917 | 47381.6 |
| imidazolonepropionase | SAMN05421827_12172 | Not Available | - | 4776907 - 4779927 | 109762.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.