Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arginase family enzyme | SAMN05421827_12123 | Not Available | - | 4711467 - 4712648 | 44924.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421827_12124 | Not Available | + | 4712720 - 4713682 | 35106.3 |
| d-3-phosphoglycerate dehydrogenase | SAMN05421827_12125 | Not Available | + | 4713682 - 4714983 | 49157.3 |
| h+/cl-antiporter clca | SAMN05421827_12126 | Not Available | - | 4715434 - 4716723 | 45756.2 |
| tryptophan 2,3-dioxygenase | SAMN05421827_12127 | Not Available | + | 4716869 - 4717834 | 37675.1 |
| branched-chain amino acid aminotransferase | SAMN05421827_12128 | Not Available | + | 4717891 - 4719045 | 42923.0 |
| protein of unknown function | SAMN05421827_12129 | Not Available | - | 4719231 - 4719695 | 17045.1 |
| dna repair protein rada/sms | SAMN05421827_12130 | Not Available | - | 4720026 - 4721402 | 50219.6 |
| ribonuclease g | SAMN05421827_12131 | Not Available | - | 4721615 - 4723165 | 58724.6 |
| tetratricopeptide repeat-containing protein | SAMN05421827_12132 | Not Available | - | 4723446 - 4724324 | 31140.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.