Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_12083 | Not Available | + | 4666361 - 4666942 | 21616.6 |
| glycogen operon protein | SAMN05421827_12084 | Not Available | + | 4667268 - 4669481 | 84096.9 |
| pas domain s-box-containing protein | SAMN05421827_12085 | Not Available | + | 4669639 - 4671636 | 75536.7 |
| response regulator receiver domain-containing protein | SAMN05421827_12086 | Not Available | + | 4671633 - 4672004 | 13595.8 |
| apolipoprotein d and lipocalin family protein | SAMN05421827_12087 | Not Available | - | 4672049 - 4672594 | 20683.7 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05421827_12088 | Not Available | - | 4672826 - 4674244 | 53282.1 |
| arac-type dna-binding protein | SAMN05421827_12089 | Not Available | - | 4674768 - 4675727 | 37338.9 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05421827_12090 | Not Available | + | 4675827 - 4676936 | 41372.1 |
| excinuclease abc subunit a | SAMN05421827_12091 | Not Available | - | 4677617 - 4680121 | 91425.7 |
| hypothetical protein | SAMN05421827_12092 | Not Available | - | 4680140 - 4680424 | 11041.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.