Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type multidrug transport system, atpase component | SAMN05421827_12063 | Not Available | + | 4647931 - 4648830 | 32970.1 |
| peptidase family m1 | SAMN05421827_12064 | Not Available | + | 4648827 - 4652369 | 135222.0 |
| putative endonuclease | SAMN05421827_12065 | Not Available | + | 4652522 - 4652704 | 7311.73 |
| arac-type dna-binding protein | SAMN05421827_12066 | Not Available | - | 4653315 - 4654256 | 36398.9 |
| hypothetical protein | SAMN05421827_12067 | Not Available | - | 4654609 - 4655127 | 18780.4 |
| predicted purr-regulated permease perm | SAMN05421827_12068 | Not Available | - | 4655700 - 4656791 | 39919.1 |
| s-formylglutathione hydrolase frmb | SAMN05421827_12069 | Not Available | + | 4656977 - 4657795 | 30798.1 |
| hypothetical protein | SAMN05421827_12070 | Not Available | + | 4658027 - 4658281 | 9695.42 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_12071 | Not Available | - | 4658472 - 4658975 | 19542.3 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421827_12072 | Not Available | - | 4659356 - 4660012 | 24428.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.