Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_12023 | Not Available | + | 4610138 - 4610335 | 7501.25 |
| alpha/beta hydrolase fold | SAMN05421827_12024 | Not Available | - | 4610427 - 4611380 | 35737.2 |
| hypothetical protein | SAMN05421827_12025 | Not Available | + | 4611509 - 4611610 | 3757.78 |
| hypothetical protein | SAMN05421827_12026 | Not Available | + | 4611827 - 4612090 | 10131.6 |
| histidine kinase | SAMN05421827_12027 | Not Available | - | 4612162 - 4613244 | 41979.5 |
| dna-binding response regulator, lytr/algr family | SAMN05421827_12028 | Not Available | - | 4613482 - 4614228 | 28864.8 |
| iron complex outermembrane recepter protein | SAMN05421827_12029 | Not Available | + | 4614516 - 4616912 | 88341.3 |
| cobalt-zinc-cadmium resistance protein czca | SAMN05421827_12030 | Not Available | - | 4617118 - 4620258 | 116177.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN05421827_12031 | Not Available | - | 4620285 - 4621373 | 39570.6 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN05421827_12032 | Not Available | - | 4621381 - 4622649 | 47967.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.