Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | SAMN05421827_11973 | Not Available | + | 4548459 - 4549250 | 29896.6 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421827_11974 | Not Available | + | 4549254 - 4549895 | 23759.0 |
| predicted transcriptional regulator | SAMN05421827_11975 | Not Available | + | 4550104 - 4550481 | 14714.9 |
| tonb family c-terminal domain-containing protein | SAMN05421827_11976 | Not Available | + | 4550478 - 4552457 | 74355.3 |
| tonb-dependent outer membrane receptor, susc/raga subfamily, signature region | SAMN05421827_11977 | Not Available | + | 4552469 - 4553098 | 22572.3 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | SAMN05421827_11978 | Not Available | - | 4553559 - 4554329 | 27819.3 |
| succinate dehydrogenase subunit a | SAMN05421827_11979 | Not Available | - | 4554410 - 4556389 | 73110.7 |
| succinate dehydrogenase / fumarate reductase cytochrome b subunit | SAMN05421827_11980 | Not Available | - | 4556407 - 4557087 | 25382.5 |
| gxxexxy protein | SAMN05421827_11981 | Not Available | - | 4557344 - 4557748 | 15354.8 |
| cold shock protein (beta-ribbon, cspa family) | SAMN05421827_11982 | Not Available | - | 4557996 - 4558238 | 9005.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.