Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rep element-mobilizing transposase rayt | SAMN05421827_11963 | Not Available | + | 4541296 - 4541757 | 18260.0 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05421827_11964 | Not Available | + | 4541793 - 4542551 | 28774.7 |
| dna-binding response regulator, lytr/algr family | SAMN05421827_11965 | Not Available | - | 4542778 - 4543527 | 28510.8 |
| histidine kinase | SAMN05421827_11966 | Not Available | - | 4543584 - 4544618 | 39532.7 |
| hypothetical protein | SAMN05421827_11967 | Not Available | + | 4544871 - 4545128 | 9313.81 |
| abc-2 type transport system atp-binding protein | SAMN05421827_11968 | Not Available | + | 4545134 - 4546042 | 33050.4 |
| hypothetical protein | SAMN05421827_11969 | Not Available | + | 4546044 - 4546841 | 29977.7 |
| regulatory protein, luxr family | SAMN05421827_11970 | Not Available | - | 4546947 - 4547177 | 8938.97 |
| hypothetical protein | SAMN05421827_11971 | Not Available | + | 4547465 - 4547842 | 13537.9 |
| hypothetical protein | SAMN05421827_11972 | Not Available | + | 4547839 - 4548492 | 25456.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.