Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_11953 | Not Available | - | 4529362 - 4530546 | 43649.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_11954 | Not Available | - | 4530543 - 4531184 | 24481.2 |
| secreted repeat of unknown function | SAMN05421827_11955 | Not Available | + | 4531363 - 4532223 | 30798.6 |
| histidine triad (hit) family protein | SAMN05421827_11956 | Not Available | - | 4532280 - 4532678 | 14574.0 |
| transcription elongation factor grea | SAMN05421827_11957 | Not Available | - | 4532763 - 4533236 | 17154.6 |
| hypothetical protein | SAMN05421827_11958 | Not Available | + | 4533513 - 4535393 | 71093.5 |
| organic hydroperoxide reductase osmc/ohra | SAMN05421827_11959 | Not Available | - | 4535451 - 4535918 | 17365.6 |
| d-3-phosphoglycerate dehydrogenase | SAMN05421827_11960 | Not Available | - | 4536225 - 4537151 | 34668.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421827_11961 | Not Available | + | 4537422 - 4539908 | 91804.8 |
| nudix domain-containing protein | SAMN05421827_11962 | Not Available | + | 4540067 - 4540642 | 21680.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.